ABCA4 G863A - GET-Evidence


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(ABCA4 Gly863Ala)

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Short summary

Identified in three compound heterozygote cases of Stargardt Disease.

Variant evidence
Computational 1

Disease causing gene.

See Allikmets R et al. 1997 (9054934).


See unpublished research (below).


enrichment not significant (p = 0.11)

See Allikmets R et al. 1997 (9054934).


Segregated in three families, but no LOD score information available.

See Allikmets R et al. 1997 (9054934).

Clinical importance
Severity 4

Severe (but not total) vision loss

Treatability 2

Uncurable, but symptoms are alleviated by sunglasses and magnifiers.

See unpublished research (below).

Penetrance 5

Stargardt disease is generally 100% penetrant (mendelian disease)



High clinical importance, Uncertain pathogenic

(The "high clinical importance, uncertain" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern


Summary of published research, and additional commentary


Total cases/controls case+ case– control+ control– p-value odds ratio
Stargardt Disease, Autosomal Recessive
3 45 0 50 0.1137


Allele frequency

  • G @ chr1:94517254: 0.5% (53/10758) in EVS
  • Frequency shown in summary reports: 0.5% (53/10758)


Allikmets R, Singh N, Sun H, Shroyer NF, Hutchinson A, Chidambaram A, Gerrard B, Baird L, Stauffer D, Peiffer A, Rattner A, Smallwood P, Li Y, Anderson KL, Lewis RA, Nathans J, Leppert M, Dean M, Lupski JR. A photoreceptor cell-specific ATP-binding transporter gene (ABCR) is mutated in recessive Stargardt macular dystrophy. Nat Genet. 1997 Mar;15(3):236-46. Erratum in: Nat Genet. 1997 Sep;17(1):122. PubMed PMID: 9054934.

This variant was identified in three out of 48 families with Stargardt macular dystrophy (one is reported as compound heterozygous, it is unclear what the zygosity is in the other two families). It was not see in 50 control individuals (100 control chromosomes). p = 0.113. Pedigrees are not provided for the reported families and so it is unclear what the LOD score would be.

Cases/controls case+ case– control+ control– p-value odds ratio
Stargardt Disease, Autosomal Recessive
3 45 0 50 0.1137


Added in this revision:

Maugeri A, Flothmann K, Hemmrich N, Ingvast S, Jorge P, Paloma E, Patel R, Rozet JM, Tammur J, Testa F, Balcells S, Bird AC, Brunner HG, Hoyng CB, Metspalu A, Simonelli F, Allikmets R, Bhattacharya SS, D'Urso M, Gonzàlez-Duarte R, Kaplan J, te Meerman GJ, Santos R, Schwartz M, Van Camp G, Wadelius C, Weber BH, Cremers FP. The ABCA4 2588G>C Stargardt mutation: single origin and increasing frequency from South-West to North-East Europe. Eur J Hum Genet. 2002 Mar;10(3):197-203. PubMed PMID: 11973624.





Other external references

  • rs76157638
  • GeneTests records for the ABCA4 gene
    Age-related macular degeneration
    ABCA4-Related Retinitis Pigmentosa
    ABCA4-Related Stargardt Disease 1
    Age-Related Macular Degeneration 2
    Cone-Rod Dystrophy, Type 3
    Retinitis Pigmentosa, Autosomal Recessive
    Stargardt Disease, Autosomal Recessive
  • Score: 0.991 (probably damaging)

Other in silico analyses

  • NBLOSUM100 score = 1
  • GET-Evidence autoscore = 5

Edit history

Gene search

"GENE" or "GENE A123C":

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