TRPM6 V1393I - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

TRPM6 V1393I

(TRPM6 Val1393Ile)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • T @ chr9:77377410: 14.4% (1546/10758) in EVS
  • T @ chr9:76567229: 14.1% (18/128) in GET-Evidence
  • Frequency shown in summary reports: 14.4% (1546/10758)

Publications
 

Genomes
 

 

 

hu604D39 - CGI sample GS00253-DNA_B02_200_37
het T @ chr9:77377410

 

 

 

GS06994 - var-GS06994-1100-36-ASM
het T @ chr9:76567230

 

GS18501 - var-GS18501-1100-36-ASM
het T @ chr9:76567230

 

GS18504 - var-GS18504-1100-36-ASM
het T @ chr9:76567230

 

GS18956 - var-GS18956-1100-36-ASM
het T @ chr9:76567230

 

GS19017 - var-GS19017-1100-36-ASM
het T @ chr9:76567230

 

GS19020 - var-GS19020-1100-36-ASM
het T @ chr9:76567230

 

GS19025 - var-GS19025-1100-36-ASM
hom T @ chr9:76567230

 

GS19026 - var-GS19026-1100-36-ASM
het T @ chr9:76567230

 

GS19129 - var-GS19129-1100-36-ASM
het T @ chr9:76567230

 

GS19649 - var-GS19649-1100-36-ASM
het T @ chr9:76567230

 

GS19701 - var-GS19701-1100-36-ASM
het T @ chr9:76567230

 

GS19704 - var-GS19704-1100-36-ASM
het T @ chr9:76567230

 

GS19735 - var-GS19735-1100-36-ASM
het T @ chr9:76567230

 

Other external references
 

    dbSNP
  • rs3750425
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi
    PolyPhen-2
  • Score: 0.013 (benign)

Other in silico analyses
 

  • NBLOSUM100 score = –4
  • GET-Evidence autoscore = 2

Edit history
 

Gene search

"GENE" or "GENE A123C":

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