SYNE1 L885V - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

SYNE1 L885V

(SYNE1 Leu885Val)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • C @ chr6:152777095: 6.3% (681/10758) in EVS
  • C @ chr6:152818787: 4.7% (6/128) in GET-Evidence
  • Frequency shown in summary reports: 6.3% (681/10758)

Publications
 

Genomes
 

hu7A4AD1 - CGI sample GS01669-DNA_C05 from PGP sample 42408046
het C @ chr6:152777095

 

huBAAC98 - CGI sample GS01173-DNA_F02 from PGP sample 70008981
het C @ chr6:152777095

 

huD81F3D - CGI sample GS01173-DNA_D06 from PGP sample 69488604
het C @ chr6:152777095

 

GS10851 - var-GS10851-1100-36-ASM
het C @ chr6:152818788

 

GS18505 - var-GS18505-1100-36-ASM
het C @ chr6:152818788

 

GS19025 - var-GS19025-1100-36-ASM
het C @ chr6:152818788

 

GS19704 - var-GS19704-1100-36-ASM
het C @ chr6:152818788

 

Other external references
 

    dbSNP
  • rs17082709
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi
    PolyPhen-2
  • Score: 0.006 (benign)
    Web search results (0 hits -- see all)

Other in silico analyses
 

  • NBLOSUM100 score = 0
  • GET-Evidence autoscore = 2

Edit history
 

Gene search

"GENE" or "GENE A123C":

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