SPAG16 D56N - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

SPAG16 D56N

(SPAG16 Asp56Asn)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • A @ chr2:214160817: 1.5% (156/10740) in EVS
  • A @ chr2:213869061: 1.6% (2/128) in GET-Evidence
  • Frequency shown in summary reports: 1.5% (156/10740)

Publications
 

Genomes
 

hu04FD18 - CGI sample GS00253-DNA_F01_200_37
het A @ chr2:214160817

 

hu92C40A - CGI sample GS01175-DNA_G03 from PGP sample 92527586
het A @ chr2:214160817

 

GS10851 - var-GS10851-1100-36-ASM
het A @ chr2:213869062

 

Other external references
 

    dbSNP
  • rs61752198
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi
    PolyPhen-2
  • Score: 0.665 (possibly damaging)

Other in silico analyses
 

  • NBLOSUM100 score = –1
  • GET-Evidence autoscore = 1

Edit history
 

Gene search

"GENE" or "GENE A123C":

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