PNPLA5 T200I - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

PNPLA5 T200I

(PNPLA5 Thr200Ile)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • A @ chr22:44285312: 2.9% (314/10758) in EVS
  • A @ chr22:42616644: 4.7% (6/128) in GET-Evidence
  • Frequency shown in summary reports: 2.9% (314/10758)

Publications
 

Genomes
 

hu2DBF2D - CGI sample GS01173-DNA_G02 from PGP sample 67180598
het A @ chr22:44285312

 

GS10851 - var-GS10851-1100-36-ASM
het A @ chr22:42616645

 

GS19025 - var-GS19025-1100-36-ASM
het A @ chr22:42616645

 

GS19129 - var-GS19129-1100-36-ASM
het A @ chr22:42616645

 

GS19669 - var-GS19669-1100-36-ASM
het A @ chr22:42616645

 

GS19834 - var-GS19834-1100-36-ASM
het A @ chr22:42616645

 

Other external references
 

    dbSNP
  • rs10428037
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi
    PolyPhen-2
  • Score: 0.004 (benign)

Other in silico analyses
 

  • NBLOSUM100 score = 3
  • GET-Evidence autoscore = 0

Edit history
 

Gene search

"GENE" or "GENE A123C":

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