LCT S190L - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

LCT S190L

(LCT Ser190Leu)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • A @ chr2:136594171: 0.5% (54/10758) in EVS
  • A @ chr2:136310640: 1.6% (2/128) in GET-Evidence
  • Frequency shown in summary reports: 0.5% (54/10758)

Publications
 

Genomes
 

GS19017 - var-GS19017-1100-36-ASM
het A @ chr2:136310641

 

GS19239 - var-GS19239-1100-36-ASM
het A @ chr2:136310641

 

Other external references
 

    dbSNP
  • rs35156533
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi
    Web search results (1 hit -- see all)

Other in silico analyses
 

  • NBLOSUM100 score = 6
  • GET-Evidence autoscore = 2

Edit history
 

Gene search

"GENE" or "GENE A123C":

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