HLA-DPB1 M116Shift - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

HLA-DPB1 M116Shift

(HLA-DPB1 116delMinsShift)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • G @ chr6:33156670: 45.1% (55/122) in GET-Evidence
  • Frequency shown in summary reports: 45.1% (55/122)

Publications
 

Genomes
 

hu034DB1

 

hu0D879F

 

hu43860C

 

hu604D39

 

huC30901

 

GS06994 - var-GS06994-1100-36-ASM
hom G @ chr6:33156671

 

GS07357 - var-GS07357-1100-36-ASM
hom G @ chr6:33156671

 

GS18501 - var-GS18501-1100-36-ASM
het G @ chr6:33156671

 

GS18502 - var-GS18502-1100-36-ASM
het G @ chr6:33156671

 

GS18504 - var-GS18504-1100-36-ASM
hom G @ chr6:33156671

 

GS18505 - var-GS18505-1100-36-ASM
het G @ chr6:33156671

 

GS18508 - var-GS18508-1100-36-ASM
hom G @ chr6:33156671

 

GS18517 - var-GS18517-1100-36-ASM
hom G @ chr6:33156671

 

GS18526 - var-GS18526-1100-36-ASM
het G @ chr6:33156671

 

GS18555 - var-GS18555-1100-36-ASM
hom G @ chr6:33156671

 

GS18558 - var-GS18558-1100-36-ASM
hom G @ chr6:33156671

 

GS18942 - var-GS18942-1100-36-ASM
hom G @ chr6:33156671

 

GS18947 - var-GS18947-1100-36-ASM
hom G @ chr6:33156671

 

GS18956 - var-GS18956-1100-36-ASM
hom G @ chr6:33156671

 

GS19020 - var-GS19020-1100-36-ASM
hom G @ chr6:33156671

 

GS19025 - var-GS19025-1100-36-ASM
het G @ chr6:33156671

 

GS19129 - var-GS19129-1100-36-ASM
hom G @ chr6:33156671

 

GS19239 - var-GS19239-1100-36-ASM
hom G @ chr6:33156671

 

GS19240 - var-GS19240-1100-36-ASM
hom G @ chr6:33156671

 

GS19669 - var-GS19669-1100-36-ASM
het G @ chr6:33156671

 

GS19670 - var-GS19670-1100-36-ASM
het G @ chr6:33156671

 

GS19700 - var-GS19700-1100-36-ASM
het G @ chr6:33156671

 

GS19701 - var-GS19701-1100-36-ASM
het G @ chr6:33156671

 

GS19703 - var-GS19703-1100-36-ASM
het G @ chr6:33156671

 

GS19704 - var-GS19704-1100-36-ASM
hom G @ chr6:33156671

 

GS19834 - var-GS19834-1100-36-ASM
het G @ chr6:33156671

 

GS20502 - var-GS20502-1100-36-ASM
het G @ chr6:33156671

 

GS20509 - var-GS20509-1100-36-ASM
het G @ chr6:33156671

 

GS21767 - var-GS21767-1100-36-ASM
het G @ chr6:33156671

 

Other external references
 

    dbSNP
  • rs1126532
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi

Other in silico analyses
 

  • NBLOSUM100 score = 4
  • GET-Evidence autoscore = 1

Edit history
 

Gene search

"GENE" or "GENE A123C":

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