HLA-DPB1 LF37VY - GET-Evidence

Note: This variant has not been sufficiently evaluated by a GET-Evidence editor.

To be considered sufficiently evaluated a variant must have both "variant evidence" and "clinical importance" scores filled in.

Please help improve GET-Evidence by evaluating evidence for this variant!

Curation:
Currentness:

HLA-DPB1 LF37VY

(HLA-DPB1 37_38delLFinsVY)


Short summary

 

Variant evidence
Computational -
Functional -
Case/Control -
Familial -
 
Clinical importance
Severity -
Treatability -
Penetrance -
 

Impact

Insufficiently evaluated not reviewed

(The "insufficiently evaluated" qualifier is assigned automatically based on the above evidence and importance scores.)

Inheritance pattern

unknown

Summary of published research, and additional commentary

 

Allele frequency

  • GTGTA @ chr6:33156434: 32.5% (41/126) in GET-Evidence
  • Frequency shown in summary reports: 32.5% (41/126)

Publications
 

Genomes
 

hu034DB1 - CGI sample GS00253-DNA_A02_200_37
het GTGTA @ chr6:33048457

 

hu0E64A1 - CGI sample GS01173-DNA_B02 from PGP sample 94378523
het GTGTA @ chr6:33048457

 

hu2D6140 - CGI sample GS01173-DNA_F06 from PGP sample 64191565
het GTGTA @ chr6:33048457

 

hu2DBF2D - CGI sample GS01173-DNA_G02 from PGP sample 67180598
het GTGTA @ chr6:33048457

 

hu3CAB43 - CGI sample GS01175-DNA_D03 from PGP sample 27486199
het GTGTA @ chr6:33048457

 

hu4040B8 - CGI sample GS01175-DNA_D01 from PGP sample 31286272
het GTGTA @ chr6:33048457

 

hu43860C - CGI sample GS00253-DNA_A01_200_37
het GTGTA @ chr6:33048457

 

hu604D39 - CGI sample GS00253-DNA_B02_200_37
hom GTGTA @ chr6:33048457

 

huB1FD55 - CGI sample GS01173-DNA_B07 from PGP sample 61499538
het GTGTA @ chr6:33048457

 

huBAAC98 - CGI sample GS01173-DNA_F02 from PGP sample 70008981
het GTGTA @ chr6:33048457

 

huC30901 - CGI sample GS00253-DNA_B01_200_37
het GTGTA @ chr6:33048457

 

huD37D14 - CGI sample GS01175-DNA_A04 from PGP sample 13272228
het GTGTA @ chr6:33048457

 

huFFAD87 - CGI sample GS01669-DNA_H05 from PGP sample 10971581
het GTGTA @ chr6:33048457

 

GS06994 - var-GS06994-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS07357 - var-GS07357-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS18501 - var-GS18501-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS18504 - var-GS18504-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS18505 - var-GS18505-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS18508 - var-GS18508-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS18517 - var-GS18517-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS18558 - var-GS18558-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS19020 - var-GS19020-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS19025 - var-GS19025-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS19129 - var-GS19129-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS19238 - var-GS19238-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS19239 - var-GS19239-1100-36-ASM
het GTGCA @ chr6:33156435

 

GS19240 - var-GS19240-1100-36-ASM
hom GTGTA @ chr6:33156435

 

GS19700 - var-GS19700-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS19701 - var-GS19701-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS19703 - var-GS19703-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS19704 - var-GS19704-1100-36-ASM
het GTGCA @ chr6:33156435

 

GS19834 - var-GS19834-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS20502 - var-GS20502-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS20509 - var-GS20509-1100-36-ASM
het GTGTA @ chr6:33156435

 

GS21767 - var-GS21767-1100-36-ASM
het GTGTA @ chr6:33156435

 

Other external references
 

    dbSNP
  • rs1126504
    www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi

Other in silico analyses
 

  • NBLOSUM100 score = 0
  • GET-Evidence autoscore = 0

Edit history
 

Gene search

"GENE" or "GENE A123C":

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